Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917816.1_cds_XP_016467359.1_60113
CDS Infomation

[gene=LOC107789991] [db_xref=GeneID:107789991] [protein=phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like] [protein_id=XP_016467359.1] [location=join(16025..16171,16612..16734,16993..17085,18205..18261,18430..18485,18616..18708,19306..19396,19516..19553,19692..19730,20378..20454,20524..20608,20705..20801,20892..20988,22356..22427,22612..22678,22755..22880,23939..23993,24078..24131)] [gbkey=CDS]
Sequence

ATGGCCGAAGACGCCATTCTTGCTTTTCTTCAGAAGAATGATGAGATTTCTGATAGTGGA
AAATTCGCCGACGAACATGGCTTCGCTCATGATGAGATTGTCAATGTCATTCGCAGCCTC
AATGGGTTTAGACTTGTTGATGCTCAGGATATTAGGAGAGAGAGATGGGTGCTTACTGAA
GAGGGGAAGACCTATGCTGCTGTAGGTTCTCCGGAATTTCAGCTTTTCTCAGCAGTACCA
CCCAAGGGAATTGCACGCGAGGAGTTGCAGAAAAAGTTGGATCCTGCAGTTTTTAAAATT
GGTTGCCAGCAAGCTATAAAGAACAAGTGGGTGGAGATGGCGAAGACTCATGTTTCAAGG
AAGGTCCAACATGCTGATGACAAAGTTAAAGATTTGCTCTTGCGGATACAAAATGGCGAG
GCTGTCAATCAGGAGGATATTGATGCTCTAAAGCGAAGAAAACTAATAACTCAGCAGGTT
TGGAAAGGACACTCAGTAAGAAAAGGTCCTAATTATGCTCCTAAAAGGAAAAGAGCAGCT
ACTGATCTCACTCGGGAAAACTTACAGAGGGGGGACTGGAAGGAATTGGAATTTAAAGAG
TACAACTTCAGTGCTAAAGGTCAGCCAGTTGAAGGTGGCTATCTTCATCCATTGCTCAAG
GTTAGGCGGCAGATACAAATGGTTTTTCTTAATATGGGGTTTGAGGAGATGCCAACAAAT
AATTATGTCGAAAGCAGTTTTTGGAACTTTGATGCACTTTTCCAGCCACAACAGCACCCT
GCCCGTGATTCCCATGATACATTCTTTTTGAAAGTACCTTCCACTACAAAGATGCTTCCA
GAAGATTATGTTGAGCGCGTAAAACAAGTTCATGAATCTGGTGGTTACCAATCTAGGGGA
TATGGGTGTGATTGGAAAAGAGAGGAAGCAAACAAGAATCTTTTGCGGACACACACTACT
GCTGTTTCGTCAAGAATGTTGTGTGCATTGGCTCAGAAGCCGTTCTCCCCGAAGAAATAC
TATTCTATTGATCGTGTTTTCAGAAATGAAGCAGTTGATAAGACACATCTTGCTGAATTT
CACCAGATAGAAGGCTTAATATGTGACCGTGGACTTACTCTTGGTGACCTGATTGGTGTT
CTTCATGACTTCTTTTCTCGTCTAGGAATGTCCAAGCTTCGGTTCAAACCTGCTTATAAT
CCCTATACTGAGCCCAGCATGGAAATTTTCAGCTACCATGAAGGTTTACAGAAATGGATA
GAAGTTGGCAATTCTGGTATGTTTAGGCCTGAAATGCTGCTTCCCATGGGGCTTCCAGAA
GATGTTCGGGTTATTGCCTGGGGCCTTTCCCTTGAGAGGCCTACCATGATTCTCTACGGA
TATGACAACATCAGAGATCTTTTTGGTCCCAAGGTGGATCTAGCTGAACTAAAAAAGAAT
CCAATATGCCGGCTTGGACTTCAGTAA

Peptide Sequence

PEP ID

XP_016467359.1
PEP Infomation

PREDICTED: phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like [Nicotiana tabacum]
Sequence

MAEDAILAFLQKNDEISDSGKFADEHGFAHDEIVNVIRSLNGFRLVDAQDIRRERWVLTE
EGKTYAAVGSPEFQLFSAVPPKGIAREELQKKLDPAVFKIGCQQAIKNKWVEMAKTHVSR
KVQHADDKVKDLLLRIQNGEAVNQEDIDALKRRKLITQQVWKGHSVRKGPNYAPKRKRAA
TDLTRENLQRGDWKELEFKEYNFSAKGQPVEGGYLHPLLKVRRQIQMVFLNMGFEEMPTN
NYVESSFWNFDALFQPQQHPARDSHDTFFLKVPSTTKMLPEDYVERVKQVHESGGYQSRG
YGCDWKREEANKNLLRTHTTAVSSRMLCALAQKPFSPKKYYSIDRVFRNEAVDKTHLAEF
HQIEGLICDRGLTLGDLIGVLHDFFSRLGMSKLRFKPAYNPYTEPSMEIFSYHEGLQKWI
EVGNSGMFRPEMLLPMGLPEDVRVIAWGLSLERPTMILYGYDNIRDLFGPKVDLAELKKN
PICRLGLQ

Transcript Sequence

Gene sequence data has not been registered.